Difference between revisions of "TSS:Hg 232477.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance=-23 | |distance=-23 | ||
|distance_to_tss=674 | |distance_to_tss=674 | ||
| − | |end= | + | |end=96833065 |
|end_of_center_position=96833065 | |end_of_center_position=96833065 | ||
|entrez_id=3070 | |entrez_id=3070 | ||
| Line 28: | Line 28: | ||
|num_trans=16 | |num_trans=16 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=96833064 |
|start_of_center_position=96833064 | |start_of_center_position=96833064 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000676373.1 AB058698 | |transcript_name=ENST00000676373.1 AB058698 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232477.1 | |tss_id=hg_232477.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:38, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 96833064 |
|---|---|
| End of the center position in the TSS region: | 96833065 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000676373.1 AB058698 |
|---|---|
| Distance: | -23 |
| Num_trans: | 16 |
| All_trans: | ENST00000676373.1:-23 AB058698:-23 ENST00000675971.1:-33 ENST00000674725.1:-33 ENST00000674796.1:-35 ENST00000676381.1:-40 ENST00000371097.8:-85 AL834245:-85 ENST00000356016.7:-110 ENST00000675125.1:-116 NM_032440:-120 ENST00000675117.1:-129 ENST00000675537.1:-159 MP015211:185 ENST00000676314.1:341 ENST00000675915.1:341 |
TATA-Box annotation
| Distance to TSS: | 674 |
|---|---|
| Nearest PromoterID: | NM_001289075 |
| Entrez ID: | 3070 |
| Nearest Unigene: | Hs.463677 |
| Nearest Refseq: | NM_018063 |
| Nearest Ensembl: | ENSG00000119969 |
| Gene Name: | ligand dependent nuclear receptor corepressor |
| Gene Alias: | ICF4|LSH|Nbla10143|PASG|SMARCA6 |
| Gene Description: | helicase, lymphoid specific |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
