Difference between revisions of "TSS:Hg 232823.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PIG19= | |PIG19= | ||
|all_trans=AB528342:-83 KJ897262:-84 KR710208:-84 DQ893115:-87 DQ896389:-87 EU176780:-87 M30262:-176 ENST00000376480.7:-181 ENST00000610706.1:-181 NM_006172:-181 BC005893:-181 K02044:388 | |all_trans=AB528342:-83 KJ897262:-84 KR710208:-84 DQ893115:-87 DQ896389:-87 EU176780:-87 M30262:-176 ENST00000376480.7:-181 ENST00000610706.1:-181 NM_006172:-181 BC005893:-181 K02044:388 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=-83 | |distance=-83 | ||
|distance_to_tss=628 | |distance_to_tss=628 | ||
| − | |end= | + | |end=11847602 |
|end_of_center_position=11847599 | |end_of_center_position=11847599 | ||
|entrez_id=3939 | |entrez_id=3939 | ||
| Line 27: | Line 27: | ||
|num_trans=12 | |num_trans=12 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=11847595 |
|start_of_center_position=11847598 | |start_of_center_position=11847598 | ||
|strand=- | |strand=- | ||
|transcript_name=AB528342 | |transcript_name=AB528342 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232823.1 | |tss_id=hg_232823.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:46, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11847598 |
|---|---|
| End of the center position in the TSS region: | 11847599 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB528342 |
|---|---|
| Distance: | -83 |
| Num_trans: | 12 |
| All_trans: | AB528342:-83 KJ897262:-84 KR710208:-84 DQ893115:-87 DQ896389:-87 EU176780:-87 M30262:-176 ENST00000376480.7:-181 ENST00000610706.1:-181 NM_006172:-181 BC005893:-181 K02044:388 |
TATA-Box annotation
| Distance to TSS: | 628 |
|---|---|
| Nearest PromoterID: | NM_001165414 |
| Entrez ID: | 3939 |
| Nearest Unigene: | Hs.2795 |
| Nearest Refseq: | NM_005566 |
| Nearest Ensembl: | ENSG00000134333 |
| Gene Name: | natriuretic peptide A |
| Gene Alias: | GSD11|HEL-S-133P|LDHM|PIG19 |
| Gene Description: | lactate dehydrogenase A |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
