Difference between revisions of "TSS:Hg 233275.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_001377301:276 ENST00000679176.1:283 ENST00000367993.7:286 NM_004550:286 BC008868:286 | |all_trans=NM_001377301:276 ENST00000679176.1:283 ENST00000367993.7:286 NM_004550:286 BC008868:286 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=276 | |distance=276 | ||
|distance_to_tss=106 | |distance_to_tss=106 | ||
| − | |end= | + | |end=161199029 |
|end_of_center_position=161199028 | |end_of_center_position=161199028 | ||
|entrez_id=120793 | |entrez_id=120793 | ||
| Line 24: | Line 24: | ||
|num_trans=5 | |num_trans=5 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=161199025 |
|start_of_center_position=161199027 | |start_of_center_position=161199027 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=NM_001377301 | |transcript_name=NM_001377301 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233275.1 | |tss_id=hg_233275.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:57, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 161199027 |
|---|---|
| End of the center position in the TSS region: | 161199028 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001377301 |
|---|---|
| Distance: | 276 |
| Num_trans: | 5 |
| All_trans: | NM_001377301:276 ENST00000679176.1:283 ENST00000367993.7:286 NM_004550:286 BC008868:286 |
TATA-Box annotation
| Distance to TSS: | 106 |
|---|---|
| Nearest PromoterID: | NM_001005179 |
| Entrez ID: | 120793 |
| Nearest Unigene: | Hs.553571 |
| Nearest Refseq: | NM_001005179 |
| Nearest Ensembl: | ENSG00000183389 |
| Gene Name: | NADH:ubiquinone oxidoreductase core subunit S2 |
| Gene Alias: | OR11-49 |
| Gene Description: | olfactory receptor family 56 subfamily A member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
