Difference between revisions of "TSS:Hg 233406.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AJ535465:69 BC104662:-163 BC025986:-311 BX538238:-311 FJ209305:-311 ENST00000620902.1:-314 ENST00000617791.1:-314 ENST00000544868.2:-314 AF001541:372 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=69 |
|distance_to_tss=-21 | |distance_to_tss=-21 | ||
| − | |end= | + | |end=65499362 |
|end_of_center_position=65499359 | |end_of_center_position=65499359 | ||
|entrez_id=100130348 | |entrez_id=100130348 | ||
| Line 12: | Line 12: | ||
|gene_description=transmembrane protein 262 | |gene_description=transmembrane protein 262 | ||
|gene_id=100130348 | |gene_id=100130348 | ||
| − | |gene_name= | + | |gene_name=TMEM262 |
|gene_source=HGNC:49389 | |gene_source=HGNC:49389 | ||
|gene_symbol=TMEM262 | |gene_symbol=TMEM262 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001242631 | |nearest_refseq=NM_001242631 | ||
|nearest_unigene=Hs.98170 | |nearest_unigene=Hs.98170 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
| − | |start= | + | |start=65499355 |
|start_of_center_position=65499358 | |start_of_center_position=65499358 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=AJ535465 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233406.1 | |tss_id=hg_233406.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=E9PQX1 | |uniprot_id=E9PQX1 | ||
}} | }} | ||
Latest revision as of 09:00, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 65499358 |
|---|---|
| End of the center position in the TSS region: | 65499359 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AJ535465 |
|---|---|
| Distance: | 69 |
| Num_trans: | 9 |
| All_trans: | AJ535465:69 BC104662:-163 BC025986:-311 BX538238:-311 FJ209305:-311 ENST00000620902.1:-314 ENST00000617791.1:-314 ENST00000544868.2:-314 AF001541:372 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_001282448 |
| Entrez ID: | 100130348 |
| Nearest Unigene: | Hs.98170 |
| Nearest Refseq: | NM_001242631 |
| Nearest Ensembl: | ENSG00000187066 |
| Gene Name: | TMEM262 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 262 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
