Difference between revisions of "TSS:Hg 233750.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF206690:201 MA442267:201 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=201 |
|distance_to_tss=1419 | |distance_to_tss=1419 | ||
| − | |end= | + | |end=19485522 |
|end_of_center_position=19485513 | |end_of_center_position=19485513 | ||
|entrez_id=102466751 | |entrez_id=102466751 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_106918 | |nearest_refseq=NR_106918 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=2 |
|peakPage= | |peakPage= | ||
|peak_id=hg_233750.1 | |peak_id=hg_233750.1 | ||
|peak_score= | |peak_score= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=19485503 |
|start_of_center_position=19485512 | |start_of_center_position=19485512 | ||
| − | |strand= | + | |strand=+ |
|tata_box= | |tata_box= | ||
| − | |transcript_name= | + | |transcript_name=LF206690 MA442267 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233750.1 | |tss_id=hg_233750.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 09:07, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19485512 |
|---|---|
| End of the center position in the TSS region: | 19485513 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF206690 MA442267 |
|---|---|
| Distance: | 201 |
| Num_trans: | 2 |
| All_trans: | LF206690:201 MA442267:201 |
TATA-Box annotation
| Distance to TSS: | 1419 |
|---|---|
| Nearest PromoterID: | NR_106918 |
| Entrez ID: | 102466751 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106918 |
| Nearest Ensembl: | ENSG00000278267 |
| Gene Name: | MIR6859-1 |
| Gene Alias: | hsa-mir-6859-1 |
| Gene Description: | microRNA 6859-1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
