Difference between revisions of "TSS:Hg 233786.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CAPPB= | ||
| + | |CAPZ= | ||
|all_trans=ENST00000459967.6:16 uc057cwu.1:16 ENST00000264203.7:42 uc009vpk.5:42 AK125085:42 ENST00000482808.1:67 uc057cwx.1:67 BC107752:68 ENST00000375142.5:70 uc021ohr.3:70 ENST00000264202.7:78 uc001bce.5:78 AK313113:78 NM_001206541:-82 NM_004930:-82 NM_001206540:-82 NM_001313932:-82 | |all_trans=ENST00000459967.6:16 uc057cwu.1:16 ENST00000264203.7:42 uc009vpk.5:42 AK125085:42 ENST00000482808.1:67 uc057cwx.1:67 BC107752:68 ENST00000375142.5:70 uc021ohr.3:70 ENST00000264202.7:78 uc001bce.5:78 AK313113:78 NM_001206541:-82 NM_004930:-82 NM_001206540:-82 NM_001313932:-82 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
| − | |end= | + | |end=201177814 |
| + | |end_of_center_position=201177810 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=CAPB | + | |gene_alias=CAPB{{!}}CAPPB{{!}}CAPZ |
| − | |gene_description=capping actin protein of muscle Z-line beta | + | |gene_description=capping actin protein of muscle Z-line subunit beta |
|gene_id=832 | |gene_id=832 | ||
| − | |gene_name= | + | |gene_name=CAPZB |
|gene_source=HGNC:1491 | |gene_source=HGNC:1491 | ||
|gene_symbol=CAPZB | |gene_symbol=CAPZB | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=201177805 |
| − | |strand= | + | |start_of_center_position=201177809 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name= |
| + | |tss_classification=no | ||
|tss_id=hg_233786.1 | |tss_id=hg_233786.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 09:08, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 201177809 |
|---|---|
| End of the center position in the TSS region: | 201177810 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000459967.6:16 uc057cwu.1:16 ENST00000264203.7:42 uc009vpk.5:42 AK125085:42 ENST00000482808.1:67 uc057cwx.1:67 BC107752:68 ENST00000375142.5:70 uc021ohr.3:70 ENST00000264202.7:78 uc001bce.5:78 AK313113:78 NM_001206541:-82 NM_004930:-82 NM_001206540:-82 NM_001313932:-82 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_001206540 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | CAPZB |
| Gene Alias: | CAPB|CAPPB|CAPZ |
| Gene Description: | capping actin protein of muscle Z-line subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
