Difference between revisions of "TSS:Hg 234953.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |FAM138F= | ||
|all_trans= | |all_trans= | ||
| − | |chr= | + | |chr=chr13 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-449 | |distance_to_tss=-449 | ||
| − | |end= | + | |end=94479311 |
| − | |entrez_id= | + | |end_of_center_position=94479310 |
| + | |entrez_id=641702 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=F379 | + | |gene_alias=F379 |
| − | |gene_description=family with sequence similarity 138 member | + | |gene_description=family with sequence similarity 138 member F |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=FAM138F |
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
| Line 17: | Line 19: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000282591 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_026820 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_026820 |
|nearest_unigene=Hs.569137 | |nearest_unigene=Hs.569137 | ||
|num_trans=0 | |num_trans=0 | ||
| Line 26: | Line 28: | ||
|peak_score= | |peak_score= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=94479307 |
| + | |start_of_center_position=94479309 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
Latest revision as of 09:35, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94479309 |
|---|---|
| End of the center position in the TSS region: | 94479310 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -449 |
|---|---|
| Nearest PromoterID: | NR_026820 |
| Entrez ID: | 641702 |
| Nearest Unigene: | Hs.569137 |
| Nearest Refseq: | NR_026820 |
| Nearest Ensembl: | ENSG00000282591 |
| Gene Name: | FAM138F |
| Gene Alias: | F379 |
| Gene Description: | family with sequence similarity 138 member F |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
