Difference between revisions of "TSS:Hg 236126.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC036671:1 ENST00000675812.1:-12 NM_198681:-30 ENST00000377740.5:53 AK096347:53 | |all_trans=BC036671:1 ENST00000675812.1:-12 NM_198681:-30 ENST00000377740.5:53 AK096347:53 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=1 | |distance=1 | ||
|distance_to_tss=-440 | |distance_to_tss=-440 | ||
| − | |end= | + | |end=6520062 |
|end_of_center_position=6520062 | |end_of_center_position=6520062 | ||
|entrez_id=197407 | |entrez_id=197407 | ||
| Line 24: | Line 24: | ||
|num_trans=5 | |num_trans=5 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=6520061 |
|start_of_center_position=6520061 | |start_of_center_position=6520061 | ||
|strand=- | |strand=- | ||
Revision as of 10:02, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6520061 |
|---|---|
| End of the center position in the TSS region: | 6520062 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC036671 |
|---|---|
| Distance: | 1 |
| Num_trans: | 5 |
| All_trans: | BC036671:1 ENST00000675812.1:-12 NM_198681:-30 ENST00000377740.5:53 AK096347:53 |
TATA-Box annotation
| Distance to TSS: | -440 |
|---|---|
| Nearest PromoterID: | NM_001214906 |
| Entrez ID: | 197407 |
| Nearest Unigene: | Hs.513501 |
| Nearest Refseq: | NM_152652 |
| Nearest Ensembl: | ENSG00000180035 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | ZNF553 |
| Gene Description: | zinc finger protein 48 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
