Difference between revisions of "TSS:Hg 237075.1"
From referenceTSS
| Line 6: | Line 6: | ||
|HEL-176= | |HEL-176= | ||
|all_trans=NM_001353233:149 NM_001198548:149 NM_001198546:149 NM_001353232:149 NM_001353237:149 AB017800:149 ENST00000589544.5:229 BC000313:470 ENST00000590712.5:495 AK297185:495 | |all_trans=NM_001353233:149 NM_001198548:149 NM_001198546:149 NM_001353232:149 NM_001353237:149 AB017800:149 ENST00000589544.5:229 BC000313:470 ENST00000590712.5:495 AK297185:495 | ||
| − | |chr= | + | |chr=chr18 |
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=149 | |distance=149 | ||
|distance_to_tss=2772 | |distance_to_tss=2772 | ||
| − | |end= | + | |end=34223700 |
|end_of_center_position=34223700 | |end_of_center_position=34223700 | ||
|entrez_id=71 | |entrez_id=71 | ||
| Line 29: | Line 29: | ||
|num_trans=10 | |num_trans=10 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=34223699 |
|start_of_center_position=34223699 | |start_of_center_position=34223699 | ||
| − | |strand= | + | |strand=- |
|transcript_name=NM_001353233 NM_001198548 NM_001198546 NM_001353232 NM_001353237 AB017800 | |transcript_name=NM_001353233 NM_001198548 NM_001198546 NM_001353232 NM_001353237 AB017800 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_237075.1 | |tss_id=hg_237075.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=O94818 | |uniprot_id=O94818 | ||
}} | }} | ||
Revision as of 10:24, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34223699 |
|---|---|
| End of the center position in the TSS region: | 34223700 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001353233 NM_001198548 NM_001198546 NM_001353232 NM_001353237 AB017800 |
|---|---|
| Distance: | 149 |
| Num_trans: | 10 |
| All_trans: | NM_001353233:149 NM_001198548:149 NM_001198546:149 NM_001353232:149 NM_001353237:149 AB017800:149 ENST00000589544.5:229 BC000313:470 ENST00000590712.5:495 AK297185:495 |
TATA-Box annotation
| Distance to TSS: | 2772 |
|---|---|
| Nearest PromoterID: | NM_001199954 |
| Entrez ID: | 71 |
| Nearest Unigene: | Hs.514581 |
| Nearest Refseq: | NM_001614 |
| Nearest Ensembl: | ENSG00000184009 |
| Gene Name: | nucleolar protein 4 |
| Gene Alias: | ACT|ACTG|DFNA20|DFNA26|HEL-176 |
| Gene Description: | actin gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
