Difference between revisions of "TSS:Hg 237196.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HRIHFB2255= | ||
| + | |NOLP= | ||
|all_trans=ENST00000261592.9:149 NM_003787:149 NM_001198546:149 NM_001198548:149 uc010dmi.3:149 AB017800:149 ENST00000589544.5:229 uc002kxt.5:229 BC000313:470 ENST00000590712.5:495 uc060oja.1:495 AK297185:495 | |all_trans=ENST00000261592.9:149 NM_003787:149 NM_001198546:149 NM_001198548:149 uc010dmi.3:149 AB017800:149 ENST00000589544.5:229 uc002kxt.5:229 BC000313:470 ENST00000590712.5:495 uc060oja.1:495 AK297185:495 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-149 | |distance_to_tss=-149 | ||
| − | |end= | + | |end=8866372 |
| + | |end_of_center_position=8866371 | ||
|entrez_id=8715 | |entrez_id=8715 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=CT125 | + | |gene_alias=CT125{{!}}HRIHFB2255{{!}}NOLP |
|gene_description=nucleolar protein 4 | |gene_description=nucleolar protein 4 | ||
|gene_id=8715 | |gene_id=8715 | ||
| − | |gene_name= | + | |gene_name=NOL4 |
|gene_source=HGNC:7870 | |gene_source=HGNC:7870 | ||
|gene_symbol=NOL4 | |gene_symbol=NOL4 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:7870 | |hgnc_mgi_id=HGNC:7870 | ||
|nearest_ensembl=ENSG00000101746 | |nearest_ensembl=ENSG00000101746 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001353237 |
|nearest_refseq=NM_003787 | |nearest_refseq=NM_003787 | ||
|nearest_unigene=Hs.514795 | |nearest_unigene=Hs.514795 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=8866369 |
| − | |strand= | + | |start_of_center_position=8866370 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name= |
| + | |tss_classification=no | ||
|tss_id=hg_237196.1 | |tss_id=hg_237196.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=O94818 | |uniprot_id=O94818 | ||
}} | }} | ||
Latest revision as of 10:27, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8866370 |
|---|---|
| End of the center position in the TSS region: | 8866371 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000261592.9:149 NM_003787:149 NM_001198546:149 NM_001198548:149 uc010dmi.3:149 AB017800:149 ENST00000589544.5:229 uc002kxt.5:229 BC000313:470 ENST00000590712.5:495 uc060oja.1:495 AK297185:495 |
TATA-Box annotation
| Distance to TSS: | -149 |
|---|---|
| Nearest PromoterID: | NM_001353237 |
| Entrez ID: | 8715 |
| Nearest Unigene: | Hs.514795 |
| Nearest Refseq: | NM_003787 |
| Nearest Ensembl: | ENSG00000101746 |
| Gene Name: | NOL4 |
| Gene Alias: | CT125|HRIHFB2255|NOLP |
| Gene Description: | nucleolar protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
