Difference between revisions of "TSS:Hg 237197.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TGIF= | |TGIF= | ||
|all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 | |all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=NA | |distance=NA | ||
|distance_to_tss=84 | |distance_to_tss=84 | ||
| − | |end= | + | |end=8868014 |
|end_of_center_position=8868014 | |end_of_center_position=8868014 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
| Line 25: | Line 25: | ||
|num_trans=0 | |num_trans=0 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=8868013 |
|start_of_center_position=8868013 | |start_of_center_position=8868013 | ||
|strand=+ | |strand=+ | ||
Latest revision as of 10:27, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8868013 |
|---|---|
| End of the center position in the TSS region: | 8868014 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_173211 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGIF1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -12(TTTTTTAAAGTG,+,0.00) |
