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Difference between revisions of "TSS:Hg 239177.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|all_trans=NR_003287:0
 
|all_trans=NR_003287:0
|chr=chr21
+
|chr=chr2
 
|cpg_percent=0.145
 
|cpg_percent=0.145
 
|distance=NA
 
|distance=NA
 
|distance_to_tss=-4
 
|distance_to_tss=-4
|end=8441147
+
|end=21015538
 
|end_of_center_position=21015537
 
|end_of_center_position=21015537
 
|entrez_id=106632264
 
|entrez_id=106632264
Line 24: Line 24:
 
|num_trans=0
 
|num_trans=0
 
|species=human
 
|species=human
|start=8441137
+
|start=21015535
 
|start_of_center_position=21015536
 
|start_of_center_position=21015536
|strand=+
+
|strand=-
 
|transcript_name=
 
|transcript_name=
 
|tss_classification=no
 
|tss_classification=no

Latest revision as of 11:13, 14 July 2021

Basic information about the TSS


TSS ID:hg_239177.1
Species:human
Chr:chr2
TSS Classification:no
Start:21015535
End:21015538
Strand:-
TSS Score:1
Start of the center position in the TSS region:21015536
End of the center position in the TSS region:21015537



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:100008589
HGNC/MGI_ID:HGNC:37659
UniProt_ID:
Gene_name:RNA28SN1
Gene_symbol:RNA28S5
Gene_synonyms:
Gene_source:HGNC:37659



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:NR_003287:0



TATA-Box annotation


Distance to TSS:-4
Nearest PromoterID:NR_145822
Entrez ID:106632264
Nearest Unigene:
Nearest Refseq:NR_145822
Nearest Ensembl:
Gene Name:RNA28SN1
Gene Alias:RNA28S4
Gene Description:RNA, 28S ribosomal N1
Gene Type:rRNA
CpG%:0.145
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):