Difference between revisions of "TSS:Hg 241845.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001100829:102 ENST00000379426.1:153 uc010jpa.5:153 |chr=chr6 |cpg_percent=0.12 |distance=102 |distance_to_tss=-102 |end=11538125 |entrez_id=100113407...") |
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| Line 3: | Line 3: | ||
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=376 |
| − | |end= | + | |end=31947025 |
| + | |end_of_center_position=31947016 | ||
|entrez_id=100113407 | |entrez_id=100113407 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| Line 11: | Line 12: | ||
|gene_description=transmembrane protein 170B | |gene_description=transmembrane protein 170B | ||
|gene_id=100113407 | |gene_id=100113407 | ||
| − | |gene_name= | + | |gene_name=TMEM170B |
|gene_source=HGNC:34244 | |gene_source=HGNC:34244 | ||
|gene_symbol=TMEM170B | |gene_symbol=TMEM170B | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001100829 | |nearest_refseq=NM_001100829 | ||
|nearest_unigene=Hs.146317 | |nearest_unigene=Hs.146317 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=31947006 |
| − | |strand= | + | |start_of_center_position=31947015 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name= |
| + | |tss_classification=no | ||
|tss_id=hg_241845.1 | |tss_id=hg_241845.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5T4T1 | |uniprot_id=Q5T4T1 | ||
}} | }} | ||
Latest revision as of 12:14, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 31947015 |
|---|---|
| End of the center position in the TSS region: | 31947016 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NM_001100829:102 ENST00000379426.1:153 uc010jpa.5:153 |
TATA-Box annotation
| Distance to TSS: | 376 |
|---|---|
| Nearest PromoterID: | NM_001100829 |
| Entrez ID: | 100113407 |
| Nearest Unigene: | Hs.146317 |
| Nearest Refseq: | NM_001100829 |
| Nearest Ensembl: | ENSG00000205269 |
| Gene Name: | TMEM170B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 170B |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
