Difference between revisions of "TSS:Hg 242058.1"
From referenceTSS
| Line 2: | Line 2: | ||
|H4FJ= | |H4FJ= | ||
|all_trans=ENST00000465829.6:0 ENST00000541662.5:0 NM_001277335:0 NM_001367767:0 ENST00000306682.6:17 | |all_trans=ENST00000465829.6:0 ENST00000541662.5:0 NM_001277335:0 NM_001367767:0 ENST00000306682.6:17 | ||
| − | |chr= | + | |chr=chr7 |
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=277 | |distance_to_tss=277 | ||
| − | |end= | + | |end=102517785 |
|end_of_center_position=102517779 | |end_of_center_position=102517779 | ||
|entrez_id=8367 | |entrez_id=8367 | ||
| Line 25: | Line 25: | ||
|num_trans=5 | |num_trans=5 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=102517771 |
|start_of_center_position=102517778 | |start_of_center_position=102517778 | ||
|strand=- | |strand=- | ||
|tata_box=-93(GCCCTGAAAAGG,-,0.00) | |tata_box=-93(GCCCTGAAAAGG,-,0.00) | ||
|transcript_name=ENST00000465829.6 ENST00000541662.5 NM_001277335 NM_001367767 | |transcript_name=ENST00000465829.6 ENST00000541662.5 NM_001277335 NM_001367767 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242058.1 | |tss_id=hg_242058.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=C9J798 F5GXT2 | |uniprot_id=C9J798 F5GXT2 | ||
}} | }} | ||
Revision as of 12:19, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102517778 |
|---|---|
| End of the center position in the TSS region: | 102517779 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000465829.6 ENST00000541662.5 NM_001277335 NM_001367767 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000465829.6:0 ENST00000541662.5:0 NM_001277335:0 NM_001367767:0 ENST00000306682.6:17 |
TATA-Box annotation
| Distance to TSS: | 277 |
|---|---|
| Nearest PromoterID: | NM_003545 |
| Entrez ID: | 8367 |
| Nearest Unigene: | Hs.662174 |
| Nearest Refseq: | NM_003545 |
| Nearest Ensembl: | ENSG00000276966 |
| Gene Name: | RAS p21 protein activator 4B |
| Gene Alias: | H4/j|H4FJ |
| Gene Description: | histone cluster 1 H4 family member e |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -93(GCCCTGAAAAGG,-,0.00) |
