Difference between revisions of "TSS:Hg 242518.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=-60 | |distance=-60 | ||
|distance_to_tss=11720 | |distance_to_tss=11720 | ||
| − | |end= | + | |end=927156 |
|end_of_center_position=927156 | |end_of_center_position=927156 | ||
|entrez_id=6742 | |entrez_id=6742 | ||
| Line 27: | Line 27: | ||
|num_trans=6 | |num_trans=6 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=927155 |
|start_of_center_position=927155 | |start_of_center_position=927155 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000449296.6 ENST00000446141.5 NM_001284310 AK092471 | |transcript_name=ENST00000449296.6 ENST00000446141.5 NM_001284310 AK092471 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242518.1 | |tss_id=hg_242518.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=H0Y7Q1 O75689 | |uniprot_id=H0Y7Q1 O75689 | ||
}} | }} | ||
Revision as of 12:29, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 927155 |
|---|---|
| End of the center position in the TSS region: | 927156 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000449296.6 ENST00000446141.5 NM_001284310 AK092471 |
|---|---|
| Distance: | -60 |
| Num_trans: | 6 |
| All_trans: | ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 AK092471:-60 ENST00000495686.1:101 ENST00000453823.5:-358 |
TATA-Box annotation
| Distance to TSS: | 11720 |
|---|---|
| Nearest PromoterID: | NM_001256510 |
| Entrez ID: | 6742 |
| Nearest Unigene: | Hs.490394 |
| Nearest Refseq: | NM_003143 |
| Nearest Ensembl: | ENSG00000106028 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | Mt-SSB|SOSS-B1|SSBP|mtSSB |
| Gene Description: | single stranded DNA binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.318408 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
