Difference between revisions of "TSS:Hg 242696.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000542437.1:-78 NM_001162914:-78 | |all_trans=ENST00000542437.1:-78 NM_001162914:-78 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=-78 | |distance=-78 | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
| − | |end= | + | |end=143708031 |
|end_of_center_position=143708031 | |end_of_center_position=143708031 | ||
|entrez_id=23386 | |entrez_id=23386 | ||
| Line 24: | Line 24: | ||
|num_trans=2 | |num_trans=2 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=143708030 |
|start_of_center_position=143708030 | |start_of_center_position=143708030 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000542437.1 NM_001162914 | |transcript_name=ENST00000542437.1 NM_001162914 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 12:33, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 143708030 |
|---|---|
| End of the center position in the TSS region: | 143708031 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000542437.1 NM_001162914 |
|---|---|
| Distance: | -78 |
| Num_trans: | 2 |
| All_trans: | ENST00000542437.1:-78 NM_001162914:-78 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_015332 |
| Entrez ID: | 23386 |
| Nearest Unigene: | Hs.488171 |
| Nearest Refseq: | NM_015332 |
| Nearest Ensembl: | ENSG00000015676 |
| Gene Name: | coiled-coil domain containing 166 |
| Gene Alias: | NudCL |
| Gene Description: | NudC domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
