Difference between revisions of "TSS:Hg 242835.1"
From referenceTSS
| Line 3: | Line 3: | ||
|SEMAH= | |SEMAH= | ||
|all_trans=AK291202:-57 ENST00000517366.1:160 ENST00000520262.6:172 NM_001257180:172 LF371616:424 MA607193:424 | |all_trans=AK291202:-57 ENST00000517366.1:160 ENST00000520262.6:172 NM_001257180:172 LF371616:424 MA607193:424 | ||
| − | |chr= | + | |chr=chr8 |
|coll-5= | |coll-5= | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-57 | |distance=-57 | ||
|distance_to_tss=178376 | |distance_to_tss=178376 | ||
| − | |end= | + | |end=42501403 |
|end_of_center_position=42501403 | |end_of_center_position=42501403 | ||
|entrez_id=9723 | |entrez_id=9723 | ||
| Line 27: | Line 27: | ||
|num_trans=6 | |num_trans=6 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=42501402 |
|start_of_center_position=42501402 | |start_of_center_position=42501402 | ||
|strand=- | |strand=- | ||
Revision as of 12:37, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 42501402 |
|---|---|
| End of the center position in the TSS region: | 42501403 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK291202 |
|---|---|
| Distance: | -57 |
| Num_trans: | 6 |
| All_trans: | AK291202:-57 ENST00000517366.1:160 ENST00000520262.6:172 NM_001257180:172 LF371616:424 MA607193:424 |
TATA-Box annotation
| Distance to TSS: | 178376 |
|---|---|
| Nearest PromoterID: | NM_001178129 |
| Entrez ID: | 9723 |
| Nearest Unigene: | Hs.440730 |
| Nearest Refseq: | NM_012431 |
| Nearest Ensembl: | ENSG00000170381 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | M-SEMAH|M-SemaK|SEMAH|coll-5 |
| Gene Description: | semaphorin 3E |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
