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Difference between revisions of "TSS:Hg 243032.1"

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{{TSSDetail
 
{{TSSDetail
 
|all_trans=ENST00000526832.5:-83 uc064res.1:-83 BC063590:-83 BC036905:126
 
|all_trans=ENST00000526832.5:-83 uc064res.1:-83 BC063590:-83 BC036905:126
|chr=chr8
+
|chr=chr9
 
|cpg_percent=0.045
 
|cpg_percent=0.045
|distance=-83
+
|distance=NA
 
|distance_to_tss=8974
 
|distance_to_tss=8974
|end=143804068
+
|end=109119914
 
|end_of_center_position=109119906
 
|end_of_center_position=109119906
 
|entrez_id=100126338
 
|entrez_id=100126338
 
|gc_percent=0.631841
 
|gc_percent=0.631841
|gene_alias=MIRN937
+
|gene_alias=MIRN937{{!}}hsa-mir-937{{!}}mir-937
 
|gene_description=microRNA 937
 
|gene_description=microRNA 937
 
|gene_id=23513
 
|gene_id=23513
|gene_name=scribbled planar cell polarity protein
+
|gene_name=MIR937
 
|gene_source=HGNC:30377
 
|gene_source=HGNC:30377
 
|gene_symbol=SCRIB
 
|gene_symbol=SCRIB
Line 20: Line 20:
 
|hsa-mir-937=
 
|hsa-mir-937=
 
|mir-937=
 
|mir-937=
|nearest_ensembl=ENSG00000180900
+
|nearest_ensembl=ENSG00000284224
 
|nearest_promoter_id=NR_030633
 
|nearest_promoter_id=NR_030633
 
|nearest_refseq=NR_030633
 
|nearest_refseq=NR_030633
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=4
+
|num_trans=0
 
|species=human
 
|species=human
|start=143804067
+
|start=109119896
 
|start_of_center_position=109119905
 
|start_of_center_position=109119905
|strand=-
+
|strand=+
|transcript_name=ENST00000526832.5 uc064res.1 BC063590
+
|transcript_name=
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_243032.1
 
|tss_id=hg_243032.1

Latest revision as of 12:41, 14 July 2021

Basic information about the TSS


TSS ID:hg_243032.1
Species:human
Chr:chr9
TSS Classification:yes
Start:109119896
End:109119914
Strand:+
TSS Score:1
Start of the center position in the TSS region:109119905
End of the center position in the TSS region:109119906



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:23513
HGNC/MGI_ID:HGNC:30377
UniProt_ID:H0YCG0
Gene_name:MIR937
Gene_symbol:SCRIB
Gene_synonyms:KIAA0147 SCRB1 Vartul
Gene_source:HGNC:30377



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:ENST00000526832.5:-83 uc064res.1:-83 BC063590:-83 BC036905:126



TATA-Box annotation


Distance to TSS:8974
Nearest PromoterID:NR_030633
Entrez ID:100126338
Nearest Unigene:
Nearest Refseq:NR_030633
Nearest Ensembl:ENSG00000284224
Gene Name:MIR937
Gene Alias:MIRN937|hsa-mir-937|mir-937
Gene Description:microRNA 937
Gene Type:ncRNA
CpG%:0.045
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):