Difference between revisions of "TSS:Hg 243033.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Vartul= | |Vartul= | ||
|all_trans=AF153416:-12 AF153418:-12 ENST00000374557.4:-238 NM_018424:-238 AB032179:-238 BC156131:280 ENST00000374566.8:-333 NM_001385623:-333 NM_019114:-333 | |all_trans=AF153416:-12 AF153418:-12 ENST00000374557.4:-238 NM_018424:-238 AB032179:-238 BC156131:280 ENST00000374566.8:-333 NM_001385623:-333 NM_019114:-333 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=-12 | |distance=-12 | ||
|distance_to_tss=464 | |distance_to_tss=464 | ||
| − | |end= | + | |end=109320726 |
|end_of_center_position=109320726 | |end_of_center_position=109320726 | ||
|entrez_id=23513 | |entrez_id=23513 | ||
| Line 27: | Line 27: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=109320725 |
|start_of_center_position=109320725 | |start_of_center_position=109320725 | ||
|strand=- | |strand=- | ||
Revision as of 12:41, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109320725 |
|---|---|
| End of the center position in the TSS region: | 109320726 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF153416 AF153418 |
|---|---|
| Distance: | -12 |
| Num_trans: | 9 |
| All_trans: | AF153416:-12 AF153418:-12 ENST00000374557.4:-238 NM_018424:-238 AB032179:-238 BC156131:280 ENST00000374566.8:-333 NM_001385623:-333 NM_019114:-333 |
TATA-Box annotation
| Distance to TSS: | 464 |
|---|---|
| Nearest PromoterID: | NM_182706 |
| Entrez ID: | 23513 |
| Nearest Unigene: | Hs.436329 |
| Nearest Refseq: | NM_015356 |
| Nearest Ensembl: | ENSG00000180900 |
| Gene Name: | erythrocyte membrane protein band 4.1 like 4B |
| Gene Alias: | CRIB1|SCRB1|SCRIB1|Vartul |
| Gene Description: | scribble planar cell polarity protein |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
