Difference between revisions of "TSS:Hg 243053.1"
From referenceTSS
| Line 2: | Line 2: | ||
|KOX9= | |KOX9= | ||
|all_trans=AK313867:149 BC033037:180 AK301872:203 ENST00000288462.4:236 BC026884:236 ENST00000374165.6:241 NM_152786:241 NM_001278630:241 NM_001278629:241 ENST00000490544.1:-452 | |all_trans=AK313867:149 BC033037:180 AK301872:203 ENST00000288462.4:236 BC026884:236 ENST00000374165.6:241 NM_152786:241 NM_001278630:241 NM_001278629:241 ENST00000490544.1:-452 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=149 | |distance=149 | ||
|distance_to_tss=-8811 | |distance_to_tss=-8811 | ||
| − | |end= | + | |end=113410506 |
|end_of_center_position=113410506 | |end_of_center_position=113410506 | ||
|entrez_id=7564 | |entrez_id=7564 | ||
| Line 25: | Line 25: | ||
|num_trans=10 | |num_trans=10 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=113410505 |
|start_of_center_position=113410505 | |start_of_center_position=113410505 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=AK313867 | |transcript_name=AK313867 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243053.1 | |tss_id=hg_243053.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B2R9P8 | |uniprot_id=B2R9P8 | ||
}} | }} | ||
Revision as of 12:42, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113410505 |
|---|---|
| End of the center position in the TSS region: | 113410506 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK313867 |
|---|---|
| Distance: | 149 |
| Num_trans: | 10 |
| All_trans: | AK313867:149 BC033037:180 AK301872:203 ENST00000288462.4:236 BC026884:236 ENST00000374165.6:241 NM_152786:241 NM_001278630:241 NM_001278629:241 ENST00000490544.1:-452 |
TATA-Box annotation
| Distance to TSS: | -8811 |
|---|---|
| Nearest PromoterID: | NM_001029976 |
| Entrez ID: | 7564 |
| Nearest Unigene: | Hs.493225 |
| Nearest Refseq: | NM_006958 |
| Nearest Ensembl: | ENSG00000170631 |
| Gene Name: | chromosome 9 open reading frame 43 |
| Gene Alias: | HZF1|KOX9 |
| Gene Description: | zinc finger protein 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
