Difference between revisions of "TSS:Hg 243095.1"
From referenceTSS
| Line 5: | Line 5: | ||
|TLD= | |TLD= | ||
|all_trans=ENST00000373670.5:63 AF255303:63 LF347064:202 MA582641:202 | |all_trans=ENST00000373670.5:63 AF255303:63 LF347064:202 MA582641:202 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=63 | |distance=63 | ||
|distance_to_tss=-85 | |distance_to_tss=-85 | ||
| − | |end= | + | |end=122898173 |
|end_of_center_position=122898173 | |end_of_center_position=122898173 | ||
|entrez_id=649 | |entrez_id=649 | ||
| Line 28: | Line 28: | ||
|num_trans=4 | |num_trans=4 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=122898172 |
|start_of_center_position=122898172 | |start_of_center_position=122898172 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000373670.5 AF255303 | |transcript_name=ENST00000373670.5 AF255303 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243095.1 | |tss_id=hg_243095.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A024R899 | |uniprot_id=A0A024R899 | ||
}} | }} | ||
Revision as of 12:43, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 122898172 |
|---|---|
| End of the center position in the TSS region: | 122898173 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373670.5 AF255303 |
|---|---|
| Distance: | 63 |
| Num_trans: | 4 |
| All_trans: | ENST00000373670.5:63 AF255303:63 LF347064:202 MA582641:202 |
TATA-Box annotation
| Distance to TSS: | -85 |
|---|---|
| Nearest PromoterID: | NM_006129 |
| Entrez ID: | 649 |
| Nearest Unigene: | Hs.1274 |
| Nearest Refseq: | NM_001199 |
| Nearest Ensembl: | ENSG00000168487 |
| Gene Name: | ring finger and CCCH-type domains 2 |
| Gene Alias: | OI13|PCOLC|PCP|PCP2|TLD |
| Gene Description: | bone morphogenetic protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
