Difference between revisions of "TSS:Hg 243106.1"
From referenceTSS
| Line 4: | Line 4: | ||
|NKX3A= | |NKX3A= | ||
|all_trans=ENST00000495728.1:7 ENST00000629845.1:27 ENST00000348462.6:31 NM_007209:31 BC010919:31 D28448:31 AK291072:33 BC000348:43 ENST00000487431.1:52 ENST00000493018.5:53 U12465:60 BC071915:61 ENST00000373570.8:73 BC094828:432 CU674168:432 KJ893256:432 KJ898381:432 DQ891363:432 DQ894543:432 CR456877:432 | |all_trans=ENST00000495728.1:7 ENST00000629845.1:27 ENST00000348462.6:31 NM_007209:31 BC010919:31 D28448:31 AK291072:33 BC000348:43 ENST00000487431.1:52 ENST00000493018.5:53 U12465:60 BC071915:61 ENST00000373570.8:73 BC094828:432 CU674168:432 KJ893256:432 KJ898381:432 DQ891363:432 DQ894543:432 CR456877:432 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=7 | |distance=7 | ||
|distance_to_tss=47261 | |distance_to_tss=47261 | ||
| − | |end= | + | |end=124861989 |
|end_of_center_position=124861989 | |end_of_center_position=124861989 | ||
|entrez_id=4824 | |entrez_id=4824 | ||
| Line 27: | Line 27: | ||
|num_trans=20 | |num_trans=20 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=124861987 |
|start_of_center_position=124861988 | |start_of_center_position=124861988 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000495728.1 | |transcript_name=ENST00000495728.1 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243106.1 | |tss_id=hg_243106.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:43, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 124861988 |
|---|---|
| End of the center position in the TSS region: | 124861989 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000495728.1 |
|---|---|
| Distance: | 7 |
| Num_trans: | 20 |
| All_trans: | ENST00000495728.1:7 ENST00000629845.1:27 ENST00000348462.6:31 NM_007209:31 BC010919:31 D28448:31 AK291072:33 BC000348:43 ENST00000487431.1:52 ENST00000493018.5:53 U12465:60 BC071915:61 ENST00000373570.8:73 BC094828:432 CU674168:432 KJ893256:432 KJ898381:432 DQ891363:432 DQ894543:432 CR456877:432 |
TATA-Box annotation
| Distance to TSS: | 47261 |
|---|---|
| Nearest PromoterID: | NM_001256339 |
| Entrez ID: | 4824 |
| Nearest Unigene: | Hs.55999 |
| Nearest Refseq: | NM_006167 |
| Nearest Ensembl: | ENSG00000167034 |
| Gene Name: | ribosomal protein L35 |
| Gene Alias: | BAPX2|NKX3|NKX3.1|NKX3A |
| Gene Description: | NK3 homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
