Difference between revisions of "TSS:Hg 243107.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000221166.9:-155 uc003xed.5:-155 |chr=chr8 |cpg_percent=0.01 |distance=-155 |distance_to_tss=-589 |end=24913178 |entrez_id=4741 |gc_percent=0.5572...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NF-M= | ||
| + | |NFM= | ||
|all_trans=ENST00000221166.9:-155 uc003xed.5:-155 | |all_trans=ENST00000221166.9:-155 uc003xed.5:-155 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-589 | |distance_to_tss=-589 | ||
| − | |end= | + | |end=124877386 |
| + | |end_of_center_position=124877386 | ||
|entrez_id=4741 | |entrez_id=4741 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=NEF3 | + | |gene_alias=NEF3{{!}}NF-M{{!}}NFM |
|gene_description=neurofilament medium | |gene_description=neurofilament medium | ||
|gene_id=4741 | |gene_id=4741 | ||
| − | |gene_name= | + | |gene_name=NEFM |
|gene_source=HGNC:7734 | |gene_source=HGNC:7734 | ||
|gene_symbol=NEFM | |gene_symbol=NEFM | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_005382 | |nearest_refseq=NM_005382 | ||
|nearest_unigene=Hs.458657 | |nearest_unigene=Hs.458657 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=124877385 |
| − | |strand= | + | |start_of_center_position=124877385 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name= |
| + | |tss_classification=no | ||
|tss_id=hg_243107.1 | |tss_id=hg_243107.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=P07197 | |uniprot_id=P07197 | ||
}} | }} | ||
Latest revision as of 12:43, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 124877385 |
|---|---|
| End of the center position in the TSS region: | 124877386 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000221166.9:-155 uc003xed.5:-155 |
TATA-Box annotation
| Distance to TSS: | -589 |
|---|---|
| Nearest PromoterID: | NM_005382 |
| Entrez ID: | 4741 |
| Nearest Unigene: | Hs.458657 |
| Nearest Refseq: | NM_005382 |
| Nearest Ensembl: | ENSG00000104722 |
| Gene Name: | NEFM |
| Gene Alias: | NEF3|NF-M|NFM |
| Gene Description: | neurofilament medium |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
