Difference between revisions of "TSS:Hg 243108.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NFM= | |NFM= | ||
|all_trans=AK307789:38 DQ892461:119 AB590437:119 KJ896906:119 | |all_trans=AK307789:38 DQ892461:119 AB590437:119 KJ896906:119 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=38 | |distance=38 | ||
|distance_to_tss=-107 | |distance_to_tss=-107 | ||
| − | |end= | + | |end=124938831 |
|end_of_center_position=124938831 | |end_of_center_position=124938831 | ||
|entrez_id=4741 | |entrez_id=4741 | ||
| Line 26: | Line 26: | ||
|num_trans=4 | |num_trans=4 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=124938830 |
|start_of_center_position=124938830 | |start_of_center_position=124938830 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AK307789 | |transcript_name=AK307789 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243108.1 | |tss_id=hg_243108.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:43, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 124938830 |
|---|---|
| End of the center position in the TSS region: | 124938831 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK307789 |
|---|---|
| Distance: | 38 |
| Num_trans: | 4 |
| All_trans: | AK307789:38 DQ892461:119 AB590437:119 KJ896906:119 |
TATA-Box annotation
| Distance to TSS: | -107 |
|---|---|
| Nearest PromoterID: | NM_001105541 |
| Entrez ID: | 4741 |
| Nearest Unigene: | Hs.458657 |
| Nearest Refseq: | NM_005382 |
| Nearest Ensembl: | ENSG00000104722 |
| Gene Name: | golgin A1 |
| Gene Alias: | NEF3|NF-M|NFM |
| Gene Description: | neurofilament medium |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
