Difference between revisions of "TSS:Hg 243140.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Unc5h4= | |Unc5h4= | ||
|all_trans=ENST00000491905.1:24 AK000975:81 ENST00000449089.6:92 AK001616:92 | |all_trans=ENST00000491905.1:24 AK000975:81 ENST00000449089.6:92 AK001616:92 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=24 | |distance=24 | ||
|distance_to_tss=-18622 | |distance_to_tss=-18622 | ||
| − | |end= | + | |end=129994963 |
|end_of_center_position=129994961 | |end_of_center_position=129994961 | ||
|entrez_id=137970 | |entrez_id=137970 | ||
| Line 25: | Line 25: | ||
|num_trans=4 | |num_trans=4 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=129994958 |
|start_of_center_position=129994960 | |start_of_center_position=129994960 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000491905.1 | |transcript_name=ENST00000491905.1 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243140.1 | |tss_id=hg_243140.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:44, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129994960 |
|---|---|
| End of the center position in the TSS region: | 129994961 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000491905.1 |
|---|---|
| Distance: | 24 |
| Num_trans: | 4 |
| All_trans: | ENST00000491905.1:24 AK000975:81 ENST00000449089.6:92 AK001616:92 |
TATA-Box annotation
| Distance to TSS: | -18622 |
|---|---|
| Nearest PromoterID: | NM_001322818 |
| Entrez ID: | 137970 |
| Nearest Unigene: | Hs.238889 |
| Nearest Refseq: | NM_080872 |
| Nearest Ensembl: | ENSG00000156687 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | PRO34692|Unc5h4 |
| Gene Description: | unc-5 netrin receptor D |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
