Difference between revisions of "TSS:Hg 243171.1"
From referenceTSS
| Line 9: | Line 9: | ||
|Ram-1= | |Ram-1= | ||
|all_trans=ENST00000312405.10:46 AJ519841:46 ENST00000460094.1:77 BC130580:79 BC144082:79 | |all_trans=ENST00000312405.10:46 AJ519841:46 ENST00000460094.1:77 BC130580:79 BC144082:79 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=46 | |distance=46 | ||
|distance_to_tss=-172 | |distance_to_tss=-172 | ||
| − | |end= | + | |end=135882943 |
|end_of_center_position=135882943 | |end_of_center_position=135882943 | ||
|entrez_id=6575 | |entrez_id=6575 | ||
| Line 32: | Line 32: | ||
|num_trans=5 | |num_trans=5 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=135882942 |
|start_of_center_position=135882942 | |start_of_center_position=135882942 | ||
|strand=- | |strand=- | ||
Revision as of 12:44, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135882942 |
|---|---|
| End of the center position in the TSS region: | 135882943 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000312405.10 AJ519841 |
|---|---|
| Distance: | 46 |
| Num_trans: | 5 |
| All_trans: | ENST00000312405.10:46 AJ519841:46 ENST00000460094.1:77 BC130580:79 BC144082:79 |
TATA-Box annotation
| Distance to TSS: | -172 |
|---|---|
| Nearest PromoterID: | NM_001257180 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | calmodulin regulated spectrin associated protein 1 |
| Gene Alias: | GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
