Difference between revisions of "TSS:Hg 243350.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC010100:116 LF355191:278 MA590768:278 ENST00000418319.5:349 LF355192:-404 MA590769:-404 BC015747:406 AK304565:439 AK293606:474 AK290860:500 | |all_trans=BC010100:116 LF355191:278 MA590768:278 ENST00000418319.5:349 LF355192:-404 MA590769:-404 BC015747:406 AK304565:439 AK293606:474 AK290860:500 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=116 | |distance=116 | ||
|distance_to_tss=6149 | |distance_to_tss=6149 | ||
| − | |end= | + | |end=81688797 |
|end_of_center_position=81688797 | |end_of_center_position=81688797 | ||
|entrez_id=1345 | |entrez_id=1345 | ||
| Line 24: | Line 24: | ||
|num_trans=10 | |num_trans=10 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=81688796 |
|start_of_center_position=81688796 | |start_of_center_position=81688796 | ||
| − | |strand= | + | |strand=- |
|transcript_name=BC010100 | |transcript_name=BC010100 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243350.1 | |tss_id=hg_243350.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:48, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 81688796 |
|---|---|
| End of the center position in the TSS region: | 81688797 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC010100 |
|---|---|
| Distance: | 116 |
| Num_trans: | 10 |
| All_trans: | BC010100:116 LF355191:278 MA590768:278 ENST00000418319.5:349 LF355192:-404 MA590769:-404 BC015747:406 AK304565:439 AK293606:474 AK290860:500 |
TATA-Box annotation
| Distance to TSS: | 6149 |
|---|---|
| Nearest PromoterID: | NM_004374 |
| Entrez ID: | 1345 |
| Nearest Unigene: | Hs.351875 |
| Nearest Refseq: | NM_004374 |
| Nearest Ensembl: | ENSG00000164919 |
| Gene Name: | TLE family member 1, transcriptional corepressor |
| Gene Alias: | - |
| Gene Description: | cytochrome c oxidase subunit 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
