Difference between revisions of "TSS:Hg 243359.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=58341 | |distance_to_tss=58341 | ||
| − | |end= | + | |end=83980197 |
|end_of_center_position=83980191 | |end_of_center_position=83980191 | ||
|entrez_id=105376194 | |entrez_id=105376194 | ||
| Line 24: | Line 24: | ||
|num_trans=20 | |num_trans=20 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=83980184 |
|start_of_center_position=83980190 | |start_of_center_position=83980190 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000457156.5 BC025321 | |transcript_name=ENST00000457156.5 BC025321 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243359.1 | |tss_id=hg_243359.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5T6W2 | |uniprot_id=Q5T6W2 | ||
}} | }} | ||
Revision as of 12:48, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 83980190 |
|---|---|
| End of the center position in the TSS region: | 83980191 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000457156.5 BC025321 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000457156.5:0 BC025321:0 AB209562:-5 AK096385:-11 AK300744:-17 ENST00000376263.8:-18 NM_031263:-18 BC000355:18 AK307962:-19 AK294067:-47 ENST00000360384.9:-53 NM_001318188:-74 NM_001318187:-74 NM_001318186:-74 BC014980:-391 ENST00000483135.1:-398 ENST00000376281.8:-407 X72727:-407 AK291336:-407 ENST00000472778.5:-419 |
TATA-Box annotation
| Distance to TSS: | 58341 |
|---|---|
| Nearest PromoterID: | NR_135141 |
| Entrez ID: | 105376194 |
| Nearest Unigene: | Hs.553289 |
| Nearest Refseq: | NR_135141 |
| Nearest Ensembl: | |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376194 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
