Difference between revisions of "TSS:Hg 243384.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=-130 | |distance=-130 | ||
|distance_to_tss=-97 | |distance_to_tss=-97 | ||
| − | |end= | + | |end=93125048 |
|end_of_center_position=93125044 | |end_of_center_position=93125044 | ||
|entrez_id=7295 | |entrez_id=7295 | ||
| Line 26: | Line 26: | ||
|num_trans=1 | |num_trans=1 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=93125038 |
|start_of_center_position=93125043 | |start_of_center_position=93125043 | ||
| − | |strand= | + | |strand=+ |
|tata_box=62(CAGTTTATAAAG,-,0.00),64(GTTTATAAAGGG,+,0.00),64(GTTTATAAAGGG,-,0.00) | |tata_box=62(CAGTTTATAAAG,-,0.00),64(GTTTATAAAGGG,+,0.00),64(GTTTATAAAGGG,-,0.00) | ||
|transcript_name=CU690563 | |transcript_name=CU690563 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243384.1 | |tss_id=hg_243384.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=H9ZYJ2 P10599 | |uniprot_id=H9ZYJ2 P10599 | ||
}} | }} | ||
Latest revision as of 12:49, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93125043 |
|---|---|
| End of the center position in the TSS region: | 93125044 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU690563 |
|---|---|
| Distance: | -130 |
| Num_trans: | 1 |
| All_trans: | CU690563:-130 |
TATA-Box annotation
| Distance to TSS: | -97 |
|---|---|
| Nearest PromoterID: | NM_001244938 |
| Entrez ID: | 7295 |
| Nearest Unigene: | Hs.435136 |
| Nearest Refseq: | NM_003329 |
| Nearest Ensembl: | ENSG00000136810 |
| Gene Name: | TXN |
| Gene Alias: | TRDX|TRX|TRX1 |
| Gene Description: | thioredoxin |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 62(CAGTTTATAAAG,-,0.00),64(GTTTATAAAGGG,+,0.00),64(GTTTATAAAGGG,-,0.00) |
