Difference between revisions of "TSS:Hg 243394.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=117 | |distance=117 | ||
|distance_to_tss=169 | |distance_to_tss=169 | ||
| − | |end= | + | |end=95508479 |
|end_of_center_position=95508479 | |end_of_center_position=95508479 | ||
|entrez_id=54107 | |entrez_id=54107 | ||
| Line 24: | Line 24: | ||
|num_trans=12 | |num_trans=12 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=95508478 |
|start_of_center_position=95508478 | |start_of_center_position=95508478 | ||
| − | |strand= | + | |strand=- |
|transcript_name=BC152919 AB527342 | |transcript_name=BC152919 AB527342 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 12:49, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 95508478 |
|---|---|
| End of the center position in the TSS region: | 95508479 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC152919 AB527342 |
|---|---|
| Distance: | 117 |
| Num_trans: | 12 |
| All_trans: | BC152919:117 AB527342:117 KY652974:118 KY652975:118 U59464:118 ENST00000421141.5:439 ENST00000547672.5:439 ENST00000546820.5:439 NM_001083605:439 NM_001083604:439 AB189438:439 AB189439:439 |
TATA-Box annotation
| Distance to TSS: | 169 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | patched 1 |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
