Difference between revisions of "TSS:Hg 243400.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |EDC1= | ||
| + | |HCP= | ||
| + | |HI30= | ||
| + | |IATIL= | ||
| + | |ITI= | ||
| + | |ITIL= | ||
| + | |ITILC= | ||
| + | |UTI= | ||
|all_trans=ENST00000603230.1:10 uc064vfo.1:10 AK310791:10 AK290837:38 X04225:57 AK310776:-58 AY544123:69 X04494:84 BC041593:-94 AB463406:126 HQ448440:128 KJ890666:128 CU692002:128 ENST00000265132.7:-131 NM_001633:-131 uc004bie.5:-131 | |all_trans=ENST00000603230.1:10 uc064vfo.1:10 AK310791:10 AK290837:38 X04225:57 AK310776:-58 AY544123:69 X04494:84 BC041593:-94 AB463406:126 HQ448440:128 KJ890666:128 CU692002:128 ENST00000265132.7:-131 NM_001633:-131 uc004bie.5:-131 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-39 |
| − | |end= | + | |end=97218230 |
| + | |end_of_center_position=97218228 | ||
|entrez_id=259 | |entrez_id=259 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=A1M | + | |gene_alias=A1M{{!}}EDC1{{!}}HCP{{!}}HI30{{!}}IATIL{{!}}ITI{{!}}ITIL{{!}}ITILC{{!}}UTI |
|gene_description=alpha-1-microglobulin/bikunin precursor | |gene_description=alpha-1-microglobulin/bikunin precursor | ||
|gene_id=259 | |gene_id=259 | ||
| − | |gene_name= | + | |gene_name=AMBP |
|gene_source=HGNC:453 | |gene_source=HGNC:453 | ||
|gene_symbol=AMBP | |gene_symbol=AMBP | ||
| Line 21: | Line 30: | ||
|nearest_refseq=NM_001633 | |nearest_refseq=NM_001633 | ||
|nearest_unigene=Hs.436911 | |nearest_unigene=Hs.436911 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=97218224 |
| + | |start_of_center_position=97218227 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243400.1 | |tss_id=hg_243400.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=S4R3Y4 | |uniprot_id=S4R3Y4 | ||
}} | }} | ||
Latest revision as of 12:49, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97218227 |
|---|---|
| End of the center position in the TSS region: | 97218228 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000603230.1:10 uc064vfo.1:10 AK310791:10 AK290837:38 X04225:57 AK310776:-58 AY544123:69 X04494:84 BC041593:-94 AB463406:126 HQ448440:128 KJ890666:128 CU692002:128 ENST00000265132.7:-131 NM_001633:-131 uc004bie.5:-131 |
TATA-Box annotation
| Distance to TSS: | -39 |
|---|---|
| Nearest PromoterID: | NM_001633 |
| Entrez ID: | 259 |
| Nearest Unigene: | Hs.436911 |
| Nearest Refseq: | NM_001633 |
| Nearest Ensembl: | ENSG00000106927 |
| Gene Name: | AMBP |
| Gene Alias: | A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI |
| Gene Description: | alpha-1-microglobulin/bikunin precursor |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
