Difference between revisions of "TSS:Hg 243436.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |RNF164= | ||
|all_trans=ENST00000373670.5:63 uc004bnb.2:63 AF255303:63 | |all_trans=ENST00000373670.5:63 uc004bnb.2:63 AF255303:63 | ||
| − | |chr= | + | |chr=chrM |
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=7186 |
| − | |end= | + | |end=1236 |
| + | |end_of_center_position=1228 | ||
|entrez_id=54542 | |entrez_id=54542 | ||
|gc_percent=0.358209 | |gc_percent=0.358209 | ||
| − | |gene_alias=MNAB | + | |gene_alias=MNAB{{!}}RNF164 |
|gene_description=ring finger and CCCH-type domains 2 | |gene_description=ring finger and CCCH-type domains 2 | ||
|gene_id=54542 | |gene_id=54542 | ||
| − | |gene_name= | + | |gene_name=RC3H2 |
|gene_source=HGNC:21461 | |gene_source=HGNC:21461 | ||
|gene_symbol=RC3H2 | |gene_symbol=RC3H2 | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=HGNC:21461 | |hgnc_mgi_id=HGNC:21461 | ||
|nearest_ensembl=ENSG00000056586 | |nearest_ensembl=ENSG00000056586 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001354479 |
|nearest_refseq=NM_018835 | |nearest_refseq=NM_018835 | ||
|nearest_unigene=Hs.533499 | |nearest_unigene=Hs.533499 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=1218 |
| + | |start_of_center_position=1227 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243436.1 | |tss_id=hg_243436.1 | ||
Latest revision as of 12:50, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1227 |
|---|---|
| End of the center position in the TSS region: | 1228 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000373670.5:63 uc004bnb.2:63 AF255303:63 |
TATA-Box annotation
| Distance to TSS: | 7186 |
|---|---|
| Nearest PromoterID: | NM_001354479 |
| Entrez ID: | 54542 |
| Nearest Unigene: | Hs.533499 |
| Nearest Refseq: | NM_018835 |
| Nearest Ensembl: | ENSG00000056586 |
| Gene Name: | RC3H2 |
| Gene Alias: | MNAB|RNF164 |
| Gene Description: | ring finger and CCCH-type domains 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.358209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
