Difference between revisions of "TSS:Hg 243438.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HQ013245:-187 ENST00000361567.2:-408 AF339085:-408 AF339086:-408 |
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance=- | + | |distance=-187 |
| − | |distance_to_tss= | + | |distance_to_tss=-29 |
| − | |end= | + | |end=12746 |
| + | |end_of_center_position=12746 | ||
|entrez_id=5695 | |entrez_id=5695 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 11: | Line 12: | ||
|gene_description=proteasome subunit beta 7 | |gene_description=proteasome subunit beta 7 | ||
|gene_id=5695 | |gene_id=5695 | ||
| − | |gene_name= | + | |gene_name=PSMB7 |
|gene_source=HGNC:9544 | |gene_source=HGNC:9544 | ||
|gene_symbol=PSMB7 | |gene_symbol=PSMB7 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_002799 | |nearest_refseq=NM_002799 | ||
|nearest_unigene=Hs.213470 | |nearest_unigene=Hs.213470 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
| − | |start= | + | |start=12744 |
| − | |strand= | + | |start_of_center_position=12745 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=HQ013245 |
| + | |tss_classification=no | ||
|tss_id=hg_243438.1 | |tss_id=hg_243438.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q99436 | |uniprot_id=Q99436 | ||
}} | }} | ||
Latest revision as of 12:50, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 12745 |
|---|---|
| End of the center position in the TSS region: | 12746 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | HQ013245 |
|---|---|
| Distance: | -187 |
| Num_trans: | 4 |
| All_trans: | HQ013245:-187 ENST00000361567.2:-408 AF339085:-408 AF339086:-408 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_002799 |
| Entrez ID: | 5695 |
| Nearest Unigene: | Hs.213470 |
| Nearest Refseq: | NM_002799 |
| Nearest Ensembl: | ENSG00000136930 |
| Gene Name: | PSMB7 |
| Gene Alias: | Z |
| Gene Description: | proteasome subunit beta 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
