Difference between revisions of "TSS:Hg 243446.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=DQ571378:279 HQ292155:388 |
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=279 |
| − | |distance_to_tss= | + | |distance_to_tss=35 |
| − | |end= | + | |end=13770 |
|end_of_center_position=13769 | |end_of_center_position=13769 | ||
|entrez_id=11224 | |entrez_id=11224 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=L35 | + | |gene_alias=DBA19{{!}}L35 |
|gene_description=ribosomal protein L35 | |gene_description=ribosomal protein L35 | ||
|gene_id=11224 | |gene_id=11224 | ||
| − | |gene_name= | + | |gene_name=RPL35 |
|gene_source=HGNC:10344 | |gene_source=HGNC:10344 | ||
|gene_symbol=RPL35 | |gene_symbol=RPL35 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_007209 | |nearest_refseq=NM_007209 | ||
|nearest_unigene=Hs.182825 | |nearest_unigene=Hs.182825 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
| − | |start= | + | |start=13766 |
|start_of_center_position=13768 | |start_of_center_position=13768 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=DQ571378 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243446.1 | |tss_id=hg_243446.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:50, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13768 |
|---|---|
| End of the center position in the TSS region: | 13769 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | DQ571378 |
|---|---|
| Distance: | 279 |
| Num_trans: | 2 |
| All_trans: | DQ571378:279 HQ292155:388 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_007209 |
| Entrez ID: | 11224 |
| Nearest Unigene: | Hs.182825 |
| Nearest Refseq: | NM_007209 |
| Nearest Ensembl: | ENSG00000136942 |
| Gene Name: | RPL35 |
| Gene Alias: | DBA19|L35 |
| Gene Description: | ribosomal protein L35 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
