Difference between revisions of "TSS:Hg 243514.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AF116701:-28 NM_015447:-49 ENST00000389532.8:-114 uc004cgr.5:-114 ENST00000409386.3:-118 uc064xae.1:-118 | |all_trans=AF116701:-28 NM_015447:-49 ENST00000389532.8:-114 uc004cgr.5:-114 ENST00000409386.3:-118 uc064xae.1:-118 | ||
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=436 |
| − | |end= | + | |end=2411 |
|end_of_center_position=2411 | |end_of_center_position=2411 | ||
|entrez_id=157922 | |entrez_id=157922 | ||
| Line 12: | Line 12: | ||
|gene_description=calmodulin regulated spectrin associated protein 1 | |gene_description=calmodulin regulated spectrin associated protein 1 | ||
|gene_id=157922 | |gene_id=157922 | ||
| − | |gene_name= | + | |gene_name=CAMSAP1 |
|gene_source=HGNC:19946 | |gene_source=HGNC:19946 | ||
|gene_symbol=CAMSAP1 | |gene_symbol=CAMSAP1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_015447 | |nearest_refseq=NM_015447 | ||
|nearest_unigene=Hs.522493 | |nearest_unigene=Hs.522493 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=2410 |
|start_of_center_position=2410 | |start_of_center_position=2410 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243514.1 | |tss_id=hg_243514.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9P1D5 | |uniprot_id=Q9P1D5 | ||
}} | }} | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 2410 |
|---|---|
| End of the center position in the TSS region: | 2411 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AF116701:-28 NM_015447:-49 ENST00000389532.8:-114 uc004cgr.5:-114 ENST00000409386.3:-118 uc064xae.1:-118 |
TATA-Box annotation
| Distance to TSS: | 436 |
|---|---|
| Nearest PromoterID: | NM_015447 |
| Entrez ID: | 157922 |
| Nearest Unigene: | Hs.522493 |
| Nearest Refseq: | NM_015447 |
| Nearest Ensembl: | ENSG00000130559 |
| Gene Name: | CAMSAP1 |
| Gene Alias: | - |
| Gene Description: | calmodulin regulated spectrin associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
