Difference between revisions of "TSS:Hg 243534.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NELF= | |NELF= | ||
| − | |all_trans= | + | |all_trans=LF641699:-287 LQ059301:-287 MA264845:-287 MS942521:-287 LF641698:-288 LQ059300:-288 MA264844:-288 MS942520:-288 LF641700:-294 LQ059302:-294 MA264846:-294 MS942522:-294 |
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=-287 |
|distance_to_tss=4524 | |distance_to_tss=4524 | ||
| − | |end= | + | |end=2939 |
|end_of_center_position=2932 | |end_of_center_position=2932 | ||
|entrez_id=26012 | |entrez_id=26012 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=HH9 | + | |gene_alias=HH9{{!}}NELF |
|gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor | |gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor | ||
|gene_id=26012 | |gene_id=26012 | ||
| − | |gene_name= | + | |gene_name=NSMF |
|gene_source=HGNC:29843 | |gene_source=HGNC:29843 | ||
|gene_symbol=NSMF | |gene_symbol=NSMF | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015537 | |nearest_refseq=NM_015537 | ||
|nearest_unigene=Hs.455336 | |nearest_unigene=Hs.455336 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
| − | |start= | + | |start=2924 |
|start_of_center_position=2931 | |start_of_center_position=2931 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF641699 LQ059301 MA264845 MS942521 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243534.1 | |tss_id=hg_243534.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B7Z8V3 | |uniprot_id=B7Z8V3 | ||
}} | }} | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2931 |
|---|---|
| End of the center position in the TSS region: | 2932 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF641699 LQ059301 MA264845 MS942521 |
|---|---|
| Distance: | -287 |
| Num_trans: | 12 |
| All_trans: | LF641699:-287 LQ059301:-287 MA264845:-287 MS942521:-287 LF641698:-288 LQ059300:-288 MA264844:-288 MS942520:-288 LF641700:-294 LQ059302:-294 MA264846:-294 MS942522:-294 |
TATA-Box annotation
| Distance to TSS: | 4524 |
|---|---|
| Nearest PromoterID: | NM_001130971 |
| Entrez ID: | 26012 |
| Nearest Unigene: | Hs.455336 |
| Nearest Refseq: | NM_015537 |
| Nearest Ensembl: | ENSG00000165802 |
| Gene Name: | NSMF |
| Gene Alias: | HH9|NELF |
| Gene Description: | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
