Difference between revisions of "TSS:Hg 243695.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC010100:116 ENST00000418319.5:349 uc064txl.1:349 BC015747:406 AK304565:439 AK293606:474 AK290860:500 |chr=chr9 |cpg_percent=0.14 |distance=116 |distanc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ESG1= | ||
| + | |GRG1= | ||
|all_trans=BC010100:116 ENST00000418319.5:349 uc064txl.1:349 BC015747:406 AK304565:439 AK293606:474 AK290860:500 | |all_trans=BC010100:116 ENST00000418319.5:349 uc064txl.1:349 BC015747:406 AK304565:439 AK293606:474 AK290860:500 | ||
| − | |chr= | + | |chr=chrX |
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=738 | |distance_to_tss=738 | ||
| − | |end= | + | |end=115863786 |
| + | |end_of_center_position=115863782 | ||
|entrez_id=7088 | |entrez_id=7088 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=ESG | + | |gene_alias=ESG{{!}}ESG1{{!}}GRG1 |
| − | |gene_description= | + | |gene_description=TLE family member 1, transcriptional corepressor |
|gene_id=7088 | |gene_id=7088 | ||
| − | |gene_name= | + | |gene_name=TLE1 |
|gene_source=HGNC:11837 | |gene_source=HGNC:11837 | ||
|gene_symbol=TLE1 | |gene_symbol=TLE1 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:11837 | |hgnc_mgi_id=HGNC:11837 | ||
|nearest_ensembl=ENSG00000196781 | |nearest_ensembl=ENSG00000196781 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001303103 |
|nearest_refseq=NM_005077 | |nearest_refseq=NM_005077 | ||
|nearest_unigene=Hs.197320 | |nearest_unigene=Hs.197320 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=115863776 |
| − | |strand= | + | |start_of_center_position=115863781 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name= |
| + | |tss_classification=no | ||
|tss_id=hg_243695.1 | |tss_id=hg_243695.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:56, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115863781 |
|---|---|
| End of the center position in the TSS region: | 115863782 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | BC010100:116 ENST00000418319.5:349 uc064txl.1:349 BC015747:406 AK304565:439 AK293606:474 AK290860:500 |
TATA-Box annotation
| Distance to TSS: | 738 |
|---|---|
| Nearest PromoterID: | NM_001303103 |
| Entrez ID: | 7088 |
| Nearest Unigene: | Hs.197320 |
| Nearest Refseq: | NM_005077 |
| Nearest Ensembl: | ENSG00000196781 |
| Gene Name: | TLE1 |
| Gene Alias: | ESG|ESG1|GRG1 |
| Gene Description: | TLE family member 1, transcriptional corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
