Difference between revisions of "TSS:Hg 243706.1"
From referenceTSS
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|NNA1= | |NNA1= | ||
|all_trans=BX648366:23 AK023280:435 AK022562:436 AL833359:478 | |all_trans=BX648366:23 AK023280:435 AK022562:436 AL833359:478 | ||
| − | |chr= | + | |chr=chrX |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=98663 | |distance_to_tss=98663 | ||
| − | |end= | + | |end=120250838 |
|end_of_center_position=120250835 | |end_of_center_position=120250835 | ||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.333333 | |gc_percent=0.333333 | ||
| − | |gene_alias=CCP1 | + | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 |
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_id=23287 | |gene_id=23287 | ||
| − | |gene_name= | + | |gene_name=AGTPBP1 |
|gene_source=HGNC:17258 | |gene_source=HGNC:17258 | ||
|gene_symbol=AGTPBP1 | |gene_symbol=AGTPBP1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:17258 | |hgnc_mgi_id=HGNC:17258 | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286717 |
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=120250831 |
|start_of_center_position=120250834 | |start_of_center_position=120250834 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243706.1 | |tss_id=hg_243706.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:56, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120250834 |
|---|---|
| End of the center position in the TSS region: | 120250835 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | BX648366:23 AK023280:435 AK022562:436 AL833359:478 |
TATA-Box annotation
| Distance to TSS: | 98663 |
|---|---|
| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | AGTPBP1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.333333 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
