Difference between revisions of "TSS:Hg 243735.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_000507:-6 AK316583:-6 AK223395:52 M19922:124 ENST00000375326.8:128 uc004auw.5:128 BC012927:128 L10320:216 AY544122:238 D26054:319 D26055:319 D26056:319 KJ891148:323 KR709624:323 KR709625:323 KR709626:323 KR709627:323 KR712246:323 KR712249:323 CU680450:323 AF073475:328 | |all_trans=NM_000507:-6 AK316583:-6 AK223395:52 M19922:124 ENST00000375326.8:128 uc004auw.5:128 BC012927:128 L10320:216 AY544122:238 D26054:319 D26055:319 D26056:319 KJ891148:323 KR709624:323 KR709625:323 KR709626:323 KR709627:323 KR712246:323 KR712249:323 CU680450:323 AF073475:328 | ||
| − | |chr= | + | |chr=chrX |
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-117 |
| − | |end= | + | |end=12976902 |
| + | |end_of_center_position=12976898 | ||
|entrez_id=2203 | |entrez_id=2203 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| Line 11: | Line 12: | ||
|gene_description=fructose-bisphosphatase 1 | |gene_description=fructose-bisphosphatase 1 | ||
|gene_id=2203 | |gene_id=2203 | ||
| − | |gene_name= | + | |gene_name=FBP1 |
|gene_source=HGNC:3606 | |gene_source=HGNC:3606 | ||
|gene_symbol=FBP1 | |gene_symbol=FBP1 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_000507 | |nearest_refseq=NM_000507 | ||
|nearest_unigene=Hs.494496 | |nearest_unigene=Hs.494496 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=12976892 |
| + | |start_of_center_position=12976897 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243735.1 | |tss_id=hg_243735.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B2RE74 P09467 | |uniprot_id=B2RE74 P09467 | ||
}} | }} | ||
Latest revision as of 12:57, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12976897 |
|---|---|
| End of the center position in the TSS region: | 12976898 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NM_000507:-6 AK316583:-6 AK223395:52 M19922:124 ENST00000375326.8:128 uc004auw.5:128 BC012927:128 L10320:216 AY544122:238 D26054:319 D26055:319 D26056:319 KJ891148:323 KR709624:323 KR709625:323 KR709626:323 KR709627:323 KR712246:323 KR712249:323 CU680450:323 AF073475:328 |
TATA-Box annotation
| Distance to TSS: | -117 |
|---|---|
| Nearest PromoterID: | NM_000507 |
| Entrez ID: | 2203 |
| Nearest Unigene: | Hs.494496 |
| Nearest Refseq: | NM_000507 |
| Nearest Ensembl: | ENSG00000165140 |
| Gene Name: | FBP1 |
| Gene Alias: | FBP |
| Gene Description: | fructose-bisphosphatase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
