Difference between revisions of "TSS:Hg 243737.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=S64600:441 |chr=chr9 |cpg_percent=0.02 |distance=441 |distance_to_tss=-86502 |end=95172603 |entrez_id=100422842 |gc_percent=0.393035 |gene_alias=mir-307...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=S64600:441 | |all_trans=S64600:441 | ||
| − | |chr= | + | |chr=chrX |
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-86502 | |distance_to_tss=-86502 | ||
| − | |end= | + | |end=12976968 |
| + | |end_of_center_position=12976963 | ||
|entrez_id=100422842 | |entrez_id=100422842 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| Line 11: | Line 12: | ||
|gene_description=microRNA 3074 | |gene_description=microRNA 3074 | ||
|gene_id=2176 | |gene_id=2176 | ||
| − | |gene_name= | + | |gene_name=MIR3074 |
|gene_source=HGNC:3584 | |gene_source=HGNC:3584 | ||
|gene_symbol=FANCC | |gene_symbol=FANCC | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_036109 | |nearest_refseq=NR_036109 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=12976956 |
| + | |start_of_center_position=12976962 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243737.1 | |tss_id=hg_243737.1 | ||
Latest revision as of 12:57, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12976962 |
|---|---|
| End of the center position in the TSS region: | 12976963 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | S64600:441 |
TATA-Box annotation
| Distance to TSS: | -86502 |
|---|---|
| Nearest PromoterID: | NR_036109 |
| Entrez ID: | 100422842 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_036109 |
| Nearest Ensembl: | ENSG00000207617 |
| Gene Name: | MIR3074 |
| Gene Alias: | mir-3074 |
| Gene Description: | microRNA 3074 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
