Difference between revisions of "TSS:Mm 100083.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |MCT 5= | ||
| + | |MCT 6= | ||
| + | |MCT5= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=4498 |
|end=115468300 | |end=115468300 | ||
| + | |end_of_center_position=115468299 | ||
|entrez_id=217316 | |entrez_id=217316 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=A130015N09Rik | + | |gene_alias=A130015N09Rik{{!}}MCT 5{{!}}MCT 6{{!}}MCT5 |
| − | |gene_description= | + | |gene_description=solute carrier family 16 (monocarboxylic acid transporters), member 5 |
|gene_name=Slc16a5 | |gene_name=Slc16a5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000045775 | |nearest_ensembl=ENSMUSG00000045775 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359609 |
|nearest_refseq=NM_001080934 | |nearest_refseq=NM_001080934 | ||
|nearest_unigene=Mm.25773 | |nearest_unigene=Mm.25773 | ||
| Line 18: | Line 22: | ||
|species=mouse | |species=mouse | ||
|start=115468296 | |start=115468296 | ||
| + | |start_of_center_position=115468298 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100083.1 | |tss_id=mm_100083.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 09:52, 16 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115468298 |
|---|---|
| End of the center position in the TSS region: | 115468299 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 4498 |
|---|---|
| Nearest PromoterID: | NM_001359609 |
| Entrez ID: | 217316 |
| Nearest Unigene: | Mm.25773 |
| Nearest Refseq: | NM_001080934 |
| Nearest Ensembl: | ENSMUSG00000045775 |
| Gene Name: | Slc16a5 |
| Gene Alias: | A130015N09Rik|MCT 5|MCT 6|MCT5 |
| Gene Description: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
