Difference between revisions of "TSS:Mm 100130.1"
From referenceTSS
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000021107.13 L04678 | |transcript_name=ENSMUST00000021107.13 L04678 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=mm_100130.1 | |tss_id=mm_100130.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A2A864 | |uniprot_id=A2A864 | ||
}} | }} | ||
Revision as of 09:53, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 115974552 |
|---|---|
| End of the center position in the TSS region: | 115974553 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000021107.13 L04678 |
|---|---|
| Distance: | 154 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000021107.13:154 L04678:154 ENSMUST00000169928.7:170 ENSMUST00000106461.7:170 NM_133663:170 NM_001005608:170 AK147424:170 ENSMUST00000151691.7:288 AK048888:288 ENSMUST00000106460.8:424 AK142648:481 |
TATA-Box annotation
| Distance to TSS: | -172 |
|---|---|
| Nearest PromoterID: | NM_001005608 |
| Entrez ID: | 192897 |
| Nearest Unigene: | Mm.213873 |
| Nearest Refseq: | NM_133663 |
| Nearest Ensembl: | ENSMUSG00000020758 |
| Gene Name: | integrin beta 4 |
| Gene Alias: | AA407042|C230078O20|CD104 |
| Gene Description: | integrin beta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
