Difference between revisions of "TSS:Mm 100141.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.05 |distance= |distance_to_tss=8115 |end=115982849 |entrez_id=192897 |gc_percent=0.572139 |gene_alias=AA407042|C230078O20|CD104 |gene_des...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C230078O20= | ||
| + | |CD104= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=8115 | |distance_to_tss=8115 | ||
|end=115982849 | |end=115982849 | ||
| + | |end_of_center_position=115982841 | ||
|entrez_id=192897 | |entrez_id=192897 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=AA407042 | + | |gene_alias=AA407042{{!}}C230078O20{{!}}CD104 |
|gene_description=integrin beta 4 | |gene_description=integrin beta 4 | ||
|gene_name=Itgb4 | |gene_name=Itgb4 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=115982831 | |start=115982831 | ||
| + | |start_of_center_position=115982840 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100141.1 | |tss_id=mm_100141.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 09:53, 16 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115982840 |
|---|---|
| End of the center position in the TSS region: | 115982841 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 8115 |
|---|---|
| Nearest PromoterID: | NM_133663 |
| Entrez ID: | 192897 |
| Nearest Unigene: | Mm.213873 |
| Nearest Refseq: | NM_133663 |
| Nearest Ensembl: | ENSMUSG00000020758 |
| Gene Name: | Itgb4 |
| Gene Alias: | AA407042|C230078O20|CD104 |
| Gene Description: | integrin beta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
