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Difference between revisions of "TSS:Mm 100216.1"

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Line 30: Line 30:
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000136584.1
 
|transcript_name=ENSMUST00000136584.1
|tss_classification=no
+
|tss_classification=yes
 
|tss_id=mm_100216.1
 
|tss_id=mm_100216.1
 
|tss_score=1
 
|tss_score=1
 
|uniprot_id=F7BPB5
 
|uniprot_id=F7BPB5
 
}}
 
}}

Revision as of 09:55, 16 July 2021

Basic information about the TSS


TSS ID:mm_100216.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116966731
End:116966735
Strand:+
TSS Score:1
Start of the center position in the TSS region:116966733
End of the center position in the TSS region:116966734



Gene and protein annotation


Transcript_name:ENSMUST00000136584.1
Distance:61
GeneID:268510
HGNC/MGI_ID:MGI:3606200
UniProt_ID:F7BPB5
Gene_name:mannoside acetylglucosaminyltransferase 5, isoenzyme B
Gene_symbol:Mgat5b
Gene_synonyms:GnT-IX
Gene_source:MGI:3606200



Transcript annotation


Transcript_name:ENSMUST00000136584.1
Distance:61
Num_trans:1
All_trans:ENSMUST00000136584.1:61



TATA-Box annotation


Distance to TSS:47870
Nearest PromoterID:NM_172948
Entrez ID:268510
Nearest Unigene:Mm.35141
Nearest Refseq:NM_172948
Nearest Ensembl:ENSMUSG00000043857
Gene Name:mannoside acetylglucosaminyltransferase 5, isoenzyme B
Gene Alias:C330018B01|GnT-IX|mGnTVB
Gene Description:mannoside acetylglucosaminyltransferase 5, isoenzyme B
Gene Type:protein-coding
CpG%:0.04
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):