Difference between revisions of "TSS:Mm 100221.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.05 |distance= |distance_to_tss=14647 |end=117092000 |entrez_id=102465258 |gc_percent=0.547264 |gene_alias=mmu-mir-6516 |gene_description=...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=14647 | |distance_to_tss=14647 | ||
|end=117092000 | |end=117092000 | ||
| + | |end_of_center_position=117091995 | ||
|entrez_id=102465258 | |entrez_id=102465258 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=117091989 | |start=117091989 | ||
| + | |start_of_center_position=117091994 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-32(GCGTATAAGAGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100221.1 | |tss_id=mm_100221.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 09:55, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117091994 |
|---|---|
| End of the center position in the TSS region: | 117091995 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 14647 |
|---|---|
| Nearest PromoterID: | NR_105853 |
| Entrez ID: | 102465258 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_105853 |
| Nearest Ensembl: | ENSMUSG00000104740 |
| Gene Name: | Mir6516 |
| Gene Alias: | mmu-mir-6516 |
| Gene Description: | microRNA 6516 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCGTATAAGAGC,-,0.00) |
