Difference between revisions of "TSS:Mm 100470.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.065 |distance= |distance_to_tss=-17774 |end=119997006 |entrez_id=100526518 |gc_percent=0.597015 |gene_alias=mir-3065|mmu-mir-3065 |gene_d...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-17774 | |distance_to_tss=-17774 | ||
|end=119997006 | |end=119997006 | ||
| + | |end_of_center_position=119996994 | ||
|entrez_id=100526518 | |entrez_id=100526518 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=mir-3065 | + | |gene_alias=mir-3065{{!}}mmu-mir-3065 |
|gene_description=microRNA 3065 | |gene_description=microRNA 3065 | ||
|gene_name=Mir3065 | |gene_name=Mir3065 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |mmu-mir-3065= | ||
|nearest_ensembl=ENSMUSG00000105524 | |nearest_ensembl=ENSMUSG00000105524 | ||
|nearest_promoter_id=NR_037225 | |nearest_promoter_id=NR_037225 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=119996980 | |start=119996980 | ||
| + | |start_of_center_position=119996993 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100470.1 | |tss_id=mm_100470.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 10:00, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119996993 |
|---|---|
| End of the center position in the TSS region: | 119996994 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -17774 |
|---|---|
| Nearest PromoterID: | NR_037225 |
| Entrez ID: | 100526518 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037225 |
| Nearest Ensembl: | ENSMUSG00000105524 |
| Gene Name: | Mir3065 |
| Gene Alias: | mir-3065|mmu-mir-3065 |
| Gene Description: | microRNA 3065 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
