Difference between revisions of "TSS:Mm 100651.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK190531:458 |chr=chr11 |cpg_percent=0.05 |distance=458 |distance_to_tss=26333 |end=3150369 |entrez_id=236604 |gc_percent=0.58209 |gene_alias=- |gene_de...") |
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| Line 4: | Line 4: | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=458 | |distance=458 | ||
| − | |distance_to_tss= | + | |distance_to_tss=26352 |
|end=3150369 | |end=3150369 | ||
| + | |end_of_center_position=3150355 | ||
|entrez_id=236604 | |entrez_id=236604 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=phosphatidylserine decarboxylase, pseudogene 1 |
|gene_name=Pisd-ps1 | |gene_name=Pisd-ps1 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| Line 19: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=3150339 | |start=3150339 | ||
| + | |start_of_center_position=3150354 | ||
|strand=- | |strand=- | ||
|transcript_name=AK190531 | |transcript_name=AK190531 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100651.1 | |tss_id=mm_100651.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 10:04, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3150354 |
|---|---|
| End of the center position in the TSS region: | 3150355 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK190531 |
|---|---|
| Distance: | 458 |
| Num_trans: | 1 |
| All_trans: | AK190531:458 |
TATA-Box annotation
| Distance to TSS: | 26352 |
|---|---|
| Nearest PromoterID: | NR_003517 |
| Entrez ID: | 236604 |
| Nearest Unigene: | Mm.247625 |
| Nearest Refseq: | NM_001004146 |
| Nearest Ensembl: | |
| Gene Name: | Pisd-ps1 |
| Gene Alias: | - |
| Gene Description: | phosphatidylserine decarboxylase, pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.05 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
