Difference between revisions of "TSS:Mm 101788.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|MTLNB= | |MTLNB= | ||
|Mltnb= | |Mltnb= | ||
| + | |all_trans=LF227035:-8 MA462612:-8 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=-8 |
|distance_to_tss=2137 | |distance_to_tss=2137 | ||
|end=46058132 | |end=46058132 | ||
| Line 11: | Line 12: | ||
|entrez_id=11492 | |entrez_id=11492 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=AL024287 | + | |gene_alias=AL024287{{!}}MADDAM{{!}}MTLNB{{!}}Mltnb |
|gene_description=a disintegrin and metallopeptidase domain 19 (meltrin beta) | |gene_description=a disintegrin and metallopeptidase domain 19 (meltrin beta) | ||
|gene_name=Adam19 | |gene_name=Adam19 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000011256 | |nearest_ensembl=ENSMUSG00000011256 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_009616 |
|nearest_refseq=NM_009616 | |nearest_refseq=NM_009616 | ||
|nearest_unigene=Mm.89940 | |nearest_unigene=Mm.89940 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=46058109 | |start=46058109 | ||
|start_of_center_position=46058120 | |start_of_center_position=46058120 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF227035 MA462612 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_101788.1 | |tss_id=mm_101788.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 10:27, 16 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46058120 |
|---|---|
| End of the center position in the TSS region: | 46058121 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF227035 MA462612 |
|---|---|
| Distance: | -8 |
| Num_trans: | 2 |
| All_trans: | LF227035:-8 MA462612:-8 |
TATA-Box annotation
| Distance to TSS: | 2137 |
|---|---|
| Nearest PromoterID: | NM_009616 |
| Entrez ID: | 11492 |
| Nearest Unigene: | Mm.89940 |
| Nearest Refseq: | NM_009616 |
| Nearest Ensembl: | ENSMUSG00000011256 |
| Gene Name: | Adam19 |
| Gene Alias: | AL024287|MADDAM|MTLNB|Mltnb |
| Gene Description: | a disintegrin and metallopeptidase domain 19 (meltrin beta) |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
