Difference between revisions of "TSS:Hg 10.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:52014 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-418 | |distance=-418 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1190 |
|end=631498 | |end=631498 | ||
| − | |entrez_id= | + | |end_of_center_position=631495 |
| + | |entrez_id=113219467 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description=microRNA | + | |gene_description=microRNA 12136 |
|gene_id= | |gene_id= | ||
|gene_name=MT-CO1 pseudogene 12 | |gene_name=MT-CO1 pseudogene 12 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:52014 | |hgnc_mgi_id=HGNC:52014 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_162149 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_162149 |
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=631491 | |start=631491 | ||
| + | |start_of_center_position=631494 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000414273.1 | |transcript_name=ENST00000414273.1 | ||
Latest revision as of 17:33, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 631494 |
|---|---|
| End of the center position in the TSS region: | 631495 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000414273.1 |
|---|---|
| Distance: | -418 |
| Num_trans: | |
| All_trans: | HGNC:52014 |
TATA-Box annotation
| Distance to TSS: | 1190 |
|---|---|
| Nearest PromoterID: | NR_162149 |
| Entrez ID: | 113219467 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162149 |
| Nearest Ensembl: | |
| Gene Name: | MT-CO1 pseudogene 12 |
| Gene Alias: | - |
| Gene Description: | microRNA 12136 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
