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Difference between revisions of "TSS:Hg 100040.1"

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Line 6: Line 6:
 
|TILRR=
 
|TILRR=
 
|TRIGNO2=
 
|TRIGNO2=
|all_trans=BC172226:3 AB160987:4
+
|all_trans=HGNC:23399
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 15: Line 15:
 
|entrez_id=158326
 
|entrez_id=158326
 
|gc_percent=0.60199
 
|gc_percent=0.60199
|gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2
+
|gene_alias=BNAR{{!}}C9orf143{{!}}C9orf145{{!}}C9orf154{{!}}MOTA{{!}}TILRR{{!}}TRIGNO2
 
|gene_description=FRAS1 related extracellular matrix 1
 
|gene_description=FRAS1 related extracellular matrix 1
 
|gene_id=158326
 
|gene_id=158326
Line 28: Line 28:
 
|nearest_refseq=NM_144966
 
|nearest_refseq=NM_144966
 
|nearest_unigene=Hs.50850
 
|nearest_unigene=Hs.50850
|num_trans=2
+
|num_trans=158326
 
|species=human
 
|species=human
 
|start=14868980
 
|start=14868980

Latest revision as of 17:34, 19 July 2021

Basic information about the TSS


TSS ID:hg_100040.1
Species:human
Chr:chr9
TSS Classification:no
Start:14868980
End:14869005
Strand:-
TSS Score:1
Start of the center position in the TSS region:14868992
End of the center position in the TSS region:14868993



Gene and protein annotation


Transcript_name:BC172226
Distance:3
GeneID:158326
HGNC/MGI_ID:HGNC:23399
UniProt_ID:
Gene_name:FRAS1 related extracellular matrix 1
Gene_symbol:FREM1
Gene_synonyms:C9orf143 C9orf145 DKFZp686M16108 FLJ25461 TILRR
Gene_source:HGNC:23399



Transcript annotation


Transcript_name:BC172226
Distance:3
Num_trans:158326
All_trans:HGNC:23399



TATA-Box annotation


Distance to TSS:41435
Nearest PromoterID:NR_163239
Entrez ID:158326
Nearest Unigene:Hs.50850
Nearest Refseq:NM_144966
Nearest Ensembl:ENSG00000164946
Gene Name:FRAS1 related extracellular matrix 1
Gene Alias:BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2
Gene Description:FRAS1 related extracellular matrix 1
Gene Type:protein-coding
CpG%:0.02
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):